Entomology/Genetics 606
Quantitative Phylogenetics
Spring 2008
Powerpoints from Lectures:
Lecture 1. Introduction to Phylogenetics
Lecture 2. Homology and Sequence Alignment
Lecture 3. Methods for Parsimony Searches
Lecture 4 (given in Lab period). Consensus Trees and New Technology Search Methods
Lecture 5. Character optimization and measures of character quality
Lecture 6. Phenetics: measures of distance and association
Lecture 7. Phenetics: clustering methods.
Lecture 8. Maximum Likelihood: Models and Model-Testing
Lecture 9. Maximum Likelihood Methods
Lecture 11. Bayesian Inference Methods
Lecture 12. Multiple Data Partitions
Lecture 14. Comparative Methods I
Lecture 15. Comparative Methods II
Lecture 17. Comparing Topologies
Lecture 18. Other ML algorithms
Lecture 19. Large Analyses Revisited